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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49281681_49286236_F

Intron Information:

Intron Rank:

129180

Intron Class:

major

Intron Phase:

Intron Coordinates:

49281681 - 49286236

Intron Length:

4556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTGTTTTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.7

41.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

92.5

0.96

0.7

88.3

28.9

Minor 5ss

38.9

-1.2

2.8

45.8

44.3

Minor BPS

70.4

0.72

1.4

84.09

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037120

49279754 - 49286602

6849