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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49293682_49296725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49293682 - 49296725

Intron Length:

3044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

TTTACTTGAATT

Flanking Amino Acid:

YARPRFVRIMDAMQITPTFK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

65.8

0.39

57.3

39.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

70.1

0.71

1.4

85.62

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005525

49293468 - 49313001

19534

ENSAPLT00000037724

49293468 - 49313546

20079