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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49300874_49302318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49300874 - 49302318

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTGTTATTGATT

Flanking Amino Acid:

AVGRAGIFSKFLHSFELLKY

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

0.58

0.9

75.1

39.1

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

62.2

0.47

1.6

79.31

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037724

49293468 - 49313546

20079

ENSAPLT00000005525

49293468 - 49313001

19534