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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49317408_49320362_F

Intron Information:

Intron Rank:

131874

Intron Class:

major

Intron Phase:

Intron Coordinates:

49317408 - 49320362

Intron Length:

2955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAATTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.2

0.68

0.8

74.7

33.8

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

71.4

0.75

1.4

87.38

32.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020216

49317199 - 49328501

11303