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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49410974_49411661_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
49410974 - 49411661

Intron Length:
688

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGCACG

5'SS Class:
major

3'SS Sequence:
GTATGTGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
ATATTTTTATAT

Flanking Amino Acid:
RRRGQQDVLRGPNVCGSRFH

Intron Amino Acid Position:
73

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.46
1.2
57.2
47.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
72.5
0.51
1.1
65.4
45.3

Minor 5ss
37.9
-1.4
3.1
41
45.2

Minor BPS
54.9
0.23
1.6
71.96
38.9

Associated Gene:

Gene:
FBN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49410756 - 49554699
143944

49410756 - 49597611
186856