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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49415794_49416356_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49415794 - 49416356

Intron Length:
563

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGGACT

5'SS Class:
major

3'SS Sequence:
GGGCTCTCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAT

U12 Branch Point Sequence:
TTGTGTCTATGT

Flanking Amino Acid:
QISPTCGPKSTQQCSIRCMN

Intron Amino Acid Position:
134

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
70.2
40

Major BPS
72.3
0.55
1.2
80.7
33.2

Major PPT
69.6
0.44
1
62
39.9

Minor 5ss
37.1
-1.5
3.3
55.8
42.2

Minor BPS
41.2
-0.5
2.4
63.69
46.9

Associated Gene:

Gene:
FBN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49410756 - 49597611
186856