Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49499439_49507265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49499439 - 49507265

Intron Length:

7827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

AATAAATTATTT

Flanking Amino Acid:

AVGVDGRVCVDTHMRSTCYG

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

68.1

0.45

58.1

38.5

Major PPT

0.63

0.8

76.9

31.7

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

45.1

-0.2

1.9

63.09

40.5

Associated Gene:

Gene:

FBN2

Ensembl Gene ID:

ENSAPLG00000005655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029199

49410756 - 49554699

143944

ENSAPLT00000005892

49410756 - 49597611

186856