Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49530848_49532147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49530848 - 49532147

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

GGCTTGATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTGGCTTGATT

Flanking Amino Acid:

WGSPCERCELDTACSRGFAR

Intron Amino Acid Position:

926

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.43

58.3

46.2

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

62.2

0.47

1.9

82.57

39.6

Associated Gene:

Gene:

FBN2

Ensembl Gene ID:

ENSAPLG00000005655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029199

49410756 - 49554699

143944

ENSAPLT00000005892

49410756 - 49597611

186856