Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49541044_49544788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49541044 - 49544788

Intron Length:

3745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GATTTTATACTT

Flanking Amino Acid:

SGFMMMKNCMDIDECERNPL

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

90.7

0.92

0.7

88.7

28.3

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

47.7

-0.1

1.8

39.1

Associated Gene:

Gene:

FBN2

Ensembl Gene ID:

ENSAPLG00000005655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029199

49410756 - 49554699

143944

ENSAPLT00000005892

49410756 - 49597611

186856