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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49561061_49561790_F


Intron Information:

Intron Rank:
37

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49561061 - 49561790

Intron Length:
730

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGAAAA

5'SS Class:
major

3'SS Sequence:
TACTTTACTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTTAT

U12 Branch Point Sequence:
TATACTTTACTT

Flanking Amino Acid:
PCETCPPVNSTEYNTLCPGG

Intron Amino Acid Position:
1615

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.55
1
71
34.5

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
76.7
0.6
0.8
75
34.3

Minor 5ss
35
-1.7
3
46.1
42.9

Minor BPS
62.1
0.46
1.6
77.57
39.2

Associated Gene:

Gene:
FBN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49410756 - 49597611
186856