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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49563206_49563800_F


Intron Information:

Intron Rank:
40

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49563206 - 49563800

Intron Length:
595

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTATGCAAA

5'SS Class:
major

3'SS Sequence:
TTCTCACATCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTCAT

U12 Branch Point Sequence:
TACTTCATAAGT

Flanking Amino Acid:
MQVNGGHNCMDMRKSFCYRS

Intron Amino Acid Position:
1722

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.1
66.8
40.4

Major BPS
83.4
0.83
0.8
83.7
25.7

Major PPT
71.3
0.48
0.9
63.6
37.5

Minor 5ss
44.3
-0.6
2.6
48.4
47.6

Minor BPS
54.2
0.21
1.9
73.45
43.3

Associated Gene:

Gene:
FBN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49410756 - 49597611
186856