Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49588976_49589641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49588976 - 49589641

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

AGATGCTAACCT

Flanking Amino Acid:

GFTQHHTACIDNNECGSQPL

Intron Amino Acid Position:

2559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.29

1.1

62.2

37.8

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

-0.3

2.3

63.75

46.2

Associated Gene:

Gene:

FBN2

Ensembl Gene ID:

ENSAPLG00000005655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005892

49410756 - 49597611

186856