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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49594810_49597236_F


Intron Information:

Intron Rank:
64

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
49594810 - 49597236

Intron Length:
2427

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTACGTATC

5'SS Class:
major

3'SS Sequence:
TCCTTTACTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAAACAT

U12 Branch Point Sequence:
TTCTCCTTTACT

Flanking Amino Acid:
NRKKRSINDTIEQISSESLD

Intron Amino Acid Position:
2773

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
1
76.7
38.9

Major BPS
63.2
0.33
1.1
69.6
35.7

Major PPT
83.4
0.75
0.8
81.4
29

Minor 5ss
39.7
-1.2
3
54.9
42.5

Minor BPS
79.4
1.01
1.5
92.36
36.7

Associated Gene:

Gene:
FBN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49410756 - 49597611
186856