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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49620061_49621471_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49620061 - 49621471

Intron Length:

1411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTGTAT

5'SS Class:

weak_major

3'SS Sequence:

ATTTTAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTAATT

Flanking Amino Acid:

DNELELYKTKTYRQIRLNEL

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

60.7

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.5

0.71

0.9

74.7

38.4

Minor 5ss

33.8

-1.9

3.4

47.8

47.7

Minor BPS

69.3

0.68

1.2

79.53

37.3

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153