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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49621608_49624718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49621608 - 49624718

Intron Length:

3111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTAATCATTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATG

Flanking Amino Acid:

GDINTKPKKENIAAFEEMIE

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.9

0.45

59.4

45.7

Minor 5ss

40.5

-1.1

Minor BPS

61.5

0.22

1.4

62.87

40.1

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153