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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49625662_49627105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49625662 - 49627105

Intron Length:

1444

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGCATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TATTATAAAAAT

Flanking Amino Acid:

KTSTQPLLKKDSKSPSSPLN

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

84.4

33.5

Major BPS

78.6

0.71

78.6

Major PPT

87.3

0.84

0.7

84.9

29.1

Minor 5ss

33.6

-1.9

4.3

56.4

Minor BPS

45.1

-0.2

2.1

68.52

41.8

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153