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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49632562_49634400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49632562 - 49634400

Intron Length:

1839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTATGTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ATTTCCTTATGT

Flanking Amino Acid:

GLMICGHVHMGPRRQAMKEL

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.25

1.2

62.6

42.3

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

67.8

0.64

1.9

86.33

39.7

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153