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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49641526_49646173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49641526 - 49646173

Intron Length:

4648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTGTTAAAAAAA

Flanking Amino Acid:

CHYGLMNNFQVMSMVSGFAP

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

0.75

78.6

Major PPT

82.6

0.73

0.9

76.5

37.5

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

42.6

-0.5

2.1

58.29

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007350

49619021 - 49721173

102153

ENSAPLT00000037806

49619021 - 49677404

58384