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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49646329_49650780_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49646329 - 49650780

Intron Length:

4452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GGGTCCACTCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TGATGATTATTT

Flanking Amino Acid:

LVYMGIAVSVGSCVVRDATG

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

59.3

0.21

48.6

40.4

Minor 5ss

-1.5

2.8

43.2

43.8

Minor BPS

46.1

-0.2

2.2

66.81

43.8

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153