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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49650866_49650956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49650866 - 49650956

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

GACTGCTGAAAT

Flanking Amino Acid:

AGANISGDLADPQSAIPKGT

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

0.42

1.1

57.3

41.7

Major PPT

80.7

0.69

0.9

77.7

40.7

Minor 5ss

32.5

-2

2.8

43.2

43.8

Minor BPS

-0

64.41

45.1

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153