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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49651701_49655912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49651701 - 49655912

Intron Length:

4212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTCTTTCTGACT

Flanking Amino Acid:

SVAGMEWEAKAQIVLLVILV

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.8

33.6

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

81.9

0.72

0.9

78.6

39.1

Minor 5ss

34.3

-1.8

3.2

43.2

38.3

Minor BPS

59.4

0.38

1.6

78.91

37.7

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007350

49619021 - 49721173

102153

ENSAPLT00000037806

49619021 - 49677404

58384