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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49656934_49658551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49656934 - 49658551

Intron Length:

1618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

GTGTGTTCAATT

Flanking Amino Acid:

AIATNGFVRGGGAYYLISRS

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

39.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

94.5

0.5

93.1

Minor 5ss

33.7

-1.9

3.5

48.3

Minor BPS

49.4

0.04

1.9

68.41

43.2

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153