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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49658648_49659219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49658648 - 49659219

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TAAACCTTAAAC

Flanking Amino Acid:

LSWIVGQAGIGLSVVVIAMA

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

0.47

69.9

32.6

Major PPT

73.5

0.53

76.7

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

67.8

0.54

1.4

71.36

38.7

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153