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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49659296_49660950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49659296 - 49660950

Intron Length:

1655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTATTACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTCATATTAAAT

Flanking Amino Acid:

VKFGWIKGVLVRCMLNIWGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.6

0.46

0.9

63.1

38.2

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

49.6

0.05

1.8

66.61

43.8

Associated Gene:

Gene:

SLC12A2

Ensembl Gene ID:

ENSAPLG00000006985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037806

49619021 - 49677404

58384

ENSAPLT00000007350

49619021 - 49721173

102153