Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49760505_49765166_R

Intron Information:

Intron Rank:

134773

Intron Class:

major

Intron Phase:

Intron Coordinates:

49760505 - 49765166

Intron Length:

4662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

ATATATAAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

68.8

43.8

Major BPS

69.8

0.49

70.3

31.8

Major PPT

76.9

0.61

69.6

41.6

Minor 5ss

38.3

-1.3

2.8

40.5

45.5

Minor BPS

45.2

-0.2

65.02

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020855

49759263 - 49767590

8328