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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49905113_49908794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49905113 - 49908794

Intron Length:

3682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

ATTTGCTTAATT

Flanking Amino Acid:

PAGGLWGFIKGVAENPMVKS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

82.3

31.4

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

73.8

0.54

0.9

71.2

38.6

Minor 5ss

44.4

-0.6

3.4

64.7

Minor BPS

75.6

0.88

1.7

90.25

33.9

Associated Gene:

Gene:

PRRC1

Ensembl Gene ID:

ENSAPLG00000008003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032872

49890710 - 49920950

30241

ENSAPLT00000032460

49890710 - 49920950

30241

ENSAPLT00000008316

49890710 - 49918924

28215