Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49966795_49967180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49966795 - 49967180

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGCT

5'SS Class:

major

3'SS Sequence:

AACTTGTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AATTCTAACACT

Flanking Amino Acid:

PGFTGALCNEVCPSGRFGKN

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

72.7

0.51

0.9

69.2

40.9

Minor 5ss

31.4

-2.1

3.7

48.4

47.3

Minor BPS

45.1

-0.3

2.2

68.2

42.7

Associated Gene:

Gene:

MEGF10

Ensembl Gene ID:

ENSAPLG00000002754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002816

49952645 - 50023889

71245