Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49969671_49979715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49969671 - 49979715

Intron Length:

10045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAG

5'SS Class:

major

3'SS Sequence:

TTTGTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATGAGCTGACCA

Flanking Amino Acid:

GYCRCLPGWSGIHCDSVCAE

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.1

40.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

31.1

-2.2

3.2

39.5

Minor BPS

43.8

-0.4

2.1

55.29

43.4

Associated Gene:

Gene:

MEGF10

Ensembl Gene ID:

ENSAPLG00000002754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002816

49952645 - 50023889

71245