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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49998921_49999522_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
49998921 - 49999522

Intron Length:
602

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTAAGCAGA

5'SS Class:
major

3'SS Sequence:
ACCAACTCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAA

U12 Branch Point Sequence:
TGTGCACCAACT

Flanking Amino Acid:
CRCPPGYTGAFCEDLCPPGK

Intron Amino Acid Position:
134

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.47
1.1
63.6
42.3

Major BPS
67
0.42
1.1
57.3
41.7

Major PPT
61.4
0.26
0.9
50.5
38.3

Minor 5ss
41.3
-1
2.9
54.6
43.8

Minor BPS
46.3
-0.2
2.2
71.5
44.5

Associated Gene:

Gene:
MEGF10

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

49952645 - 50023889
71245