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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50085711_50085988_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50085711 - 50085988

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTCTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTTATAGTGACA

Flanking Amino Acid:

AWPPPAARRQGRRSRSSCIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.8

39.3

Major BPS

75.1

0.62

65.6

Major PPT

56.9

0.16

1.1

55.8

39.2

Minor 5ss

26.5

-2.7

3.2

34.9

41.5

Minor BPS

46.7

-0.2

2.3

67.81

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003120

50085452 - 50095179

9728