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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50090877_50094170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50090877 - 50094170

Intron Length:

3294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

CATGCTTTAAGA

Flanking Amino Acid:

NKPVLTLFTKKPCPLCDEAK

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

83.6

0.76

0.7

82.3

29.8

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

56.1

0.19

1.8

63.63

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003120

50085452 - 50095179

9728