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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50110727_50122249_F

Intron Information:

Intron Rank:

127942

Intron Class:

major

Intron Phase:

Intron Coordinates:

50110727 - 50122249

Intron Length:

11523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

ATTGTAAGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

76.7

0.6

0.8

76.4

32.2

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

45.6

-0.2

69.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045674

50110665 - 50154428

43764