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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50191869_50192568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50191869 - 50192568

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

AACTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AAGTCTTTAAAA

Flanking Amino Acid:

KVVLKNSQGEEVAQRSTVFK

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

72.5

0.51

65.5

40.1

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

66.4

0.51

1.4

68.31

37.7

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020017

50191381 - 50213144

21764

ENSAPLT00000016049

50191731 - 50209765

18035

ENSAPLT00000037069

50191414 - 50206936

15523

ENSAPLT00000028236

50167519 - 50205580

38062

ENSAPLT00000020384

50191647 - 50209177

17531