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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50193278_50199839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50193278 - 50199839

Intron Length:

6562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTGTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTGATGGAAACA

Flanking Amino Acid:

FIRLKNTSEQDQPMGGWEMI

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

78.1

31.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

81.9

0.72

0.9

84.5

30.4

Minor 5ss

29.1

-2.4

2.6

31.9

42.1

Minor BPS

35.4

-1.1

2.5

46.36

43.9

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020384

50191647 - 50209177

17531

ENSAPLT00000020017

50191381 - 50213144

21764

ENSAPLT00000016049

50191731 - 50209765

18035

ENSAPLT00000039549

50191731 - 50209177

17447

ENSAPLT00000028236

50167519 - 50205580

38062