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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50200066_50200988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50200066 - 50200988

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTCCTTTGATT

Flanking Amino Acid:

YRKLLEGEEERLKLTPSPSS

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

73.4

37.3

Major BPS

0.85

0.9

39.9

Major PPT

73.9

0.54

0.9

73.3

36.3

Minor 5ss

38.9

-1.2

2.8

47.7

Minor BPS

70.1

0.71

1.1

81.19

34.2

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020384

50191647 - 50209177

17531

ENSAPLT00000037069

50191414 - 50206936

15523

ENSAPLT00000020017

50191381 - 50213144

21764

ENSAPLT00000032724

50189961 - 50209221

19261

ENSAPLT00000016049

50191731 - 50209765

18035

ENSAPLT00000031661

50191731 - 50207179

15449

ENSAPLT00000028236

50167519 - 50205580

38062

ENSAPLT00000039549

50191731 - 50209177

17447