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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50202898_50204259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50202898 - 50204259

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGATCTACTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

CTTGTCTGAACT

Flanking Amino Acid:

EELEQTYRTKLDNAKLSSEM

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

0.62

65.3

41.5

Major PPT

73.7

0.53

0.9

67.1

38.9

Minor 5ss

34.1

-1.8

41.6

Minor BPS

64.9

0.55

1.6

80.07

42.1

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016049

50191731 - 50209765

18035

ENSAPLT00000031661

50191731 - 50207179

15449

ENSAPLT00000039549

50191731 - 50209177

17447

ENSAPLT00000028236

50167519 - 50205580

38062

ENSAPLT00000020384

50191647 - 50209177

17531

ENSAPLT00000037069

50191414 - 50206936

15523

ENSAPLT00000020017

50191381 - 50213144

21764

ENSAPLT00000032724

50189961 - 50209221

19261