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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50205581_50206779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50205581 - 50206779

Intron Length:

1199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TCTTTCTTAAAG

Flanking Amino Acid:

LDDLRDQLAQLEASLAAVKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

80.6

0.69

82.2

27.1

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

71.6

0.54

1.5

72.05

40.8

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032724

50189961 - 50209221

19261

ENSAPLT00000020384

50191647 - 50209177

17531

ENSAPLT00000020017

50191381 - 50213144

21764

ENSAPLT00000039549

50191731 - 50209177

17447

ENSAPLT00000016049

50191731 - 50209765

18035

ENSAPLT00000037069

50191414 - 50206936

15523