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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50211745_50213064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50211745 - 50213064

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGATA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TGCTTCTACACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

80.6

33.4

Major BPS

75.5

0.63

40.9

Major PPT

86.9

0.83

0.7

84.6

29.4

Minor 5ss

35.9

-1.6

3.2

48.7

47.1

Minor BPS

49.7

0.06

2.1

71.56

45.6

Associated Gene:

Gene:

LMNB1

Ensembl Gene ID:

ENSAPLG00000015349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020017

50191381 - 50213144

21764