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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50257591_50259258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50257591 - 50259258

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

TTATCACTAATT

Flanking Amino Acid:

VEQNGGLFIVNGTRRRTPGG

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

78.3

0.7

32.1

Major PPT

70.8

0.47

1.1

75.5

33.3

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

61.2

0.43

1.9

83.27

37.3

Associated Gene:

Gene:

PHAX

Ensembl Gene ID:

ENSAPLG00000012512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013026

50254657 - 50264580

9924