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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50259380_50262123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50259380 - 50262123

Intron Length:

2744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

CTCTCTTTAAAG

Flanking Amino Acid:

EEKVADEIAYRLCEPKKDLI

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

70.1

43.1

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

77.1

0.61

28.2

Minor 5ss

40.1

-1.1

2.8

50.1

46.1

Minor BPS

64.6

0.32

1.5

63.96

44.2

Associated Gene:

Gene:

PHAX

Ensembl Gene ID:

ENSAPLG00000012512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013026

50254657 - 50264580

9924