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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50269978_50272645_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50269978 - 50272645

Intron Length:

2668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGCATTCG

5'SS Class:

weak_major

3'SS Sequence:

GTACCCTCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

GTACCCTCAGCA

Flanking Amino Acid:

PLCKGRVTSIICRPPRSGRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.1

47.6

37.2

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

65.1

0.34

59.5

36.5

Minor 5ss

35.9

-1.6

3.2

46.2

43.6

Minor BPS

50.7

0.02

1.8

63.69

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043998

50269366 - 50272810

3445