Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50321582_50324204_F

Intron Information:

Intron Rank:

137511

Intron Class:

major

Intron Phase:

Intron Coordinates:

50321582 - 50324204

Intron Length:

2623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTTACCG

5'SS Class:

major

3'SS Sequence:

TTTTCATTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

50.6

Major BPS

100

1.24

0.5

100

Major PPT

85.6

0.8

0.7

80.5

30.3

Minor 5ss

-1.9

2.9

40.1

45.5

Minor BPS

67.8

0.55

84.69

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032254

50321048 - 50325446

4399