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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5067179_5068684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5067179 - 5068684

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

ACATCCACATCC

Flanking Amino Acid:

STFPSSFFMQDGHHSSDPWS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

44.9

-0.4

55.21

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011620

5062703 - 5077811

15109