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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5068819_5070754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5068819 - 5070754

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CTCTTCGGCACA

Flanking Amino Acid:

YCSLHPHDRLSYPSHSSADI

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.2

35.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

68.8

0.42

63.6

Minor 5ss

29.7

-2.3

3.5

37.5

41.8

Minor BPS

41.3

-0.6

2.4

54.77

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011620

5062703 - 5077811

15109