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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5077581_5077791_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5077581 - 5077791

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

CCAGCGCAGAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTTTCCCAAATG

Flanking Amino Acid:

TPVGSPPSLSEGRGSS*

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

40.9

-0.5

1.6

34.3

34.9

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

58.1

0.12

2.1

71.93

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011620

5062703 - 5077811

15109