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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50807307_50807415_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
50807307 - 50807415

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGTATC

5'SS Class:
major

3'SS Sequence:
CGTGTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAG

U12 Branch Point Sequence:
GGGCTCTGAGCC

Flanking Amino Acid:
KAPRPAGPGNRWREELSQLK

Intron Amino Acid Position:
33

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.2
81.3
32.8

Major BPS
55.1
0.13
1.5
54.7
43.1

Major PPT
69.3
0.43
0.9
62.1
34.8

Minor 5ss
36.2
-1.6
2.8
45
36

Minor BPS
45.5
-0.3
1.6
50.35
39.6

Associated Gene:

Gene:
KLF4

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

50807075 - 50810303
3229