Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50808371_50808469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50808371 - 50808469

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGGTGCTCACTC

Flanking Amino Acid:

QLPPSTLQYQELMPPGSCLP

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

70.5

0.46

0.8

61.8

34.9

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

41.4

-0.6

2.1

46.54

43.2

Associated Gene:

Gene:

KLF4

Ensembl Gene ID:

ENSAPLG00000021516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029922

50807075 - 50810303

3229