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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50872561_50875970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50872561 - 50875970

Intron Length:

3410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACG

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTCTTCATCT

Flanking Amino Acid:

PAAVRPSSNDSTTGDTSRSN

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.8

39.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.8

0.74

0.8

76.1

32.2

Minor 5ss

39.9

-1.1

2.8

49.7

46.3

Minor BPS

60.1

0.39

1.8

79.92

42.4

Associated Gene:

Gene:

RAD23B

Ensembl Gene ID:

ENSAPLG00000028917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028974

50857461 - 50897425

39965

ENSAPLT00000045948

50857461 - 50897425

39965