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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50876219_50878235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50876219 - 50878235

Intron Length:

2017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

TGTGTCTGAATT

Flanking Amino Acid:

KNFVVVMVTKPKAAAAATQQ

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.8

85.9

23.8

Major BPS

0.3

1.4

71.9

Major PPT

67.6

0.4

0.9

63.1

33.1

Minor 5ss

33.7

-1.9

2.8

42.6

38.4

Minor BPS

61.9

0.45

1.5

77.06

39.7

Associated Gene:

Gene:

RAD23B

Ensembl Gene ID:

ENSAPLG00000028917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028974

50857461 - 50897425

39965