Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_50991148_50996355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50991148 - 50996355

Intron Length:

5208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGACCTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

CTGTGCTGACCT

Flanking Amino Acid:

EELSPKTEERDPMMFSDTGP

Intron Amino Acid Position:

2291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.63

0.9

69.2

41.5

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

47.4

-0.1

2.2

68.2

48.4

Associated Gene:

Gene:

ZNF462

Ensembl Gene ID:

ENSAPLG00000016551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022670

50989749 - 51082577

92829

ENSAPLT00000019074

50989749 - 51082577

92829